N-BIO BINDS

Update log

2017/04/01

  • [Structure] Whole 3D structures of more than 3-domain proteins can be predicted using each domain structure.

2016/04/01

  • [Structure] Whole 3D structures of 3-domain proteins can be predicted using each domain structure.
  • [Evtrace] Performance of user interface was imporved.

2015/04/01

  • [Structure] 3D structures of multi-domain proteins can be predicted from amino acid sequences.
  • [Evtrace] User intefaces were imporved.

2014/04/01

  • The appearance was altered.
  • [DiD,Interface] Domain data from CATH database are now based on CATH version v3.5.
  • [DiD,Interface] Update of domain data of the TPRP(Targeted Proteins Research Program) proteins was stopped.
  • [Evtrace] User intefaces were imporved.

2012/05/21

2012/03/10

  • [Structure] Some parameters for the domain-domain interface prediction can be set by users.
  • [Structure] User interfaces were improved.
  • [Evtrace] The program has been released.

2011/12/28

  • [Structure] The definition of score for the selection of model structure from docking poses has been updated.

2011/09/07

  • [Structure] The algorithm for detecting domain linker has been improved, and several bugs have been fixed.
  • [Structure] Data in the result page have been reorganized.
  • [Structure] The definition of the contact score has been revised.

2011/06/15

  • [DiD,Interface,Structure] Domain data from CATH database are now based on CATH version v3.4.
  • [DiD] The structure of the homologous domain (if any) for each domain in the query data, that was isolated through the structure determination process, can now be viewed from the result page.

2011/03/31

  • [DiD] Structures of the TPRP(Targeted Proteins Research Program) proteins have been added to the domain structure databases.
  • [Structure] Domain data from CATH database (version v3.3) have been added to the domain structure databases used in the domain-domain interface prediction.
  • [DiD/Statistics] Data on the domain linker length have been added.

2011/02/14

  • [DiD/Statistics] Data on the areas and the numbers of residues of domain-domain interfaces have been added.
  • [Interface] CATH (version v3.3) is now available as one of the domain structure databases.
  • [Structure] The amino acid sequence and the domain-linker location are now also represented in the result page.

2010/12/07

  • [DiD] CATH (version v3.3) is now available as one of the domain structure databases.