Database of Proteins with the Charge Periodicity of 28 residues (PCP28): SOSUIDBpcp28 | ||||||||
[From June 15, 2007] | ||||||||
Major classification symbols indicate each species: | ||||||||
V: vertebrate, IV: invertebrate(include plant and fungi), A: archaea, and B: bacteria. | ||||||||
*: The proteins with more than 100 residues | ||||||||
Major classification | Organisms | Total ORFs | Total ORFs* | Population of PCP28 |
Ratio of PCP28 to Total ORFs(%) |
Ratio of PCP28 to Total ORFs*(%) |
||
V | Pan troglodytes | 51947 | 47519 | 1057 | 2.03 | 2.22 | ||
V | Mus musculus | 46891 | 43033 | 1125 | 2.4 | 2.61 | ||
V | Homo sapiens | 40877 | 36590 | 972 | 2.38 | 2.66 | ||
V | Bos taurus | 35907 | 34111 | 795 | 2.21 | 2.33 | ||
V | Canis familiaris | 33651 | 32585 | 726 | 2.16 | 2.23 | ||
V | Danio rerio | 29720 | 28458 | 815 | 2.74 | 2.86 | ||
V | Xenopus tropicalis | 28324 | 27528 | 549 | 1.94 | 1.99 | ||
V | Rattus norvegicus | 22725 | 22203 | 338 | 1.49 | 1.52 | ||
V | Fugu rubripes | 22102 | 20829 | 251 | 1.14 | 1.21 | ||
V | Gallus gallus | 18031 | 17455 | 231 | 1.28 | 1.32 | ||
IV | Oryza sativa ssp. japonica | 66710 | 61528 | 441 | 0.66 | 0.72 | ||
IV | Populus trichocarpa | 45503 | 40112 | 367 | 0.81 | 0.91 | ||
IV | Arabidopsis thaliana | 25571 | 24574 | 172 | 0.67 | 0.7 | ||
IV | Strongylocentrotus purpuratus | 20989 | 19469 | 200 | 0.95 | 1.03 | ||
IV | Caenorhabditis elegans | 19730 | 18833 | 141 | 0.71 | 0.75 | ||
IV | Anopheles gambiae | 15212 | 14443 | 170 | 1.12 | 1.18 | ||
IV | Drosophila melanogaster | 14100 | 13121 | 111 | 0.79 | 0.85 | ||
IV | Apis mellifera | 6298 | 6256 | 60 | 0.95 | 0.96 | ||
IV | Saccharomyces cerevisiae | 6217 | 6069 | 56 | 0.9 | 0.92 | ||
IV | Schizosaccharomyces pombe | 4962 | 4816 | 40 | 0.81 | 0.83 | ||
A | Methanosarcina_acetivorans | 4540 | 3971 | 37 | 0.81 | 0.93 | ||
A | Haloarcula_marismortui_ATCC_43049 | 4240 | 3615 | 33 | 0.78 | 0.91 | ||
A | Methanosarcina_mazei | 3371 | 2986 | 20 | 0.59 | 0.67 | ||
A | Sulfolobus_solfataricus | 2977 | 2741 | 21 | 0.71 | 0.77 | ||
A | Sulfolobus_tokodaii | 2825 | 2557 | 29 | 1.03 | 1.13 | ||
A | Halobacterium_sp | 2622 | 2236 | 19 | 0.72 | 0.85 | ||
A | Pyrobaculum_aerophilum | 2605 | 2138 | 17 | 0.65 | 0.8 | ||
A | Archaeoglobus_fulgidus | 2420 | 2097 | 19 | 0.79 | 0.91 | ||
A | Thermococcus_kodakaraensis_KOD1 | 2306 | 2006 | 22 | 0.95 | 1.1 | ||
A | Sulfolobus_acidocaldarius_DSM_639 | 2223 | 1993 | 21 | 0.94 | 1.05 | ||
A | Pyrococcus_furiosus | 2125 | 1845 | 23 | 1.08 | 1.25 | ||
A | Pyrococcus_horikoshii | 1955 | 1742 | 20 | 1.02 | 1.15 | ||
A | Pyrococcus_abyssi | 1896 | 1700 | 17 | 0.9 | 1 | ||
A | Methanobacterium_thermoautotrophicum | 1873 | 1643 | 14 | 0.75 | 0.85 | ||
A | Aeropyrum_pernix | 1841 | 1752 | 15 | 0.81 | 0.86 | ||
A | Methanococcus_jannaschii | 1786 | 1602 | 18 | 1.01 | 1.12 | ||
A | Methanococcus_maripaludis_S2 | 1722 | 1548 | 15 | 0.87 | 0.97 | ||
A | Methanopyrus_kandleri | 1687 | 1551 | 15 | 0.89 | 0.97 | ||
A | Picrophilus_torridus_DSM_9790 | 1535 | 1401 | 8 | 0.52 | 0.57 | ||
A | Thermoplasma_volcanium | 1499 | 1365 | 13 | 0.87 | 0.95 | ||
A | Thermoplasma_acidophilum | 1482 | 1372 | 8 | 0.54 | 0.58 | ||
A | Nanoarchaeum_equitans | 536 | 487 | 1 | 0.19 | 0.21 | ||
B | Bradyrhizobium_japonicum | 8317 | 7641 | 58 | 0.7 | 0.76 | ||
B | Streptomyces_coelicolor | 8154 | 7517 | 71 | 0.87 | 0.94 | ||
B | Streptomyces_avermitilis | 7673 | 7118 | 54 | 0.7 | 0.76 | ||
B | Pirellula_sp | 7325 | 5394 | 47 | 0.64 | 0.87 | ||
B | Mesorhizobium_loti | 7272 | 6468 | 55 | 0.76 | 0.85 | ||
B | Sinorhizobium_meliloti | 6205 | 5674 | 49 | 0.79 | 0.86 | ||
B | Pseudomonas_fluorescens_Pf-5 | 6137 | 5736 | 40 | 0.65 | 0.7 | ||
B | Nostoc_sp | 6130 | 5258 | 31 | 0.51 | 0.59 | ||
B | Nocardia_farcinica_IFM10152 | 5936 | 5425 | 33 | 0.56 | 0.61 | ||
B | Bacillus_cereus_ATCC_10987 | 5844 | 4650 | 40 | 0.68 | 0.86 | ||
B | Burkholderia_pseudomallei_K96243 | 5728 | 5332 | 54 | 0.94 | 1.01 | ||
B | Bacillus_cereus_ZK | 5641 | 4921 | 45 | 0.8 | 0.91 | ||
B | Bacillus_anthracis_Ames_0581 | 5617 | 4515 | 39 | 0.69 | 0.86 | ||
B | Pseudomonas_syringae | 5608 | 5045 | 72 | 1.28 | 1.43 | ||
B | Pseudomonas_aeruginosa | 5567 | 5248 | 44 | 0.79 | 0.84 | ||
B | Photobacterium_profundum_SS9 | 5491 | 5079 | 29 | 0.53 | 0.57 | ||
B | Agrobacterium_tumefaciens_C58_UWash | 5402 | 4905 | 35 | 0.65 | 0.71 | ||
B | Escherichia_coli_CFT073 | 5379 | 4472 | 27 | 0.5 | 0.6 | ||
B | Pseudomonas_putida_KT2440 | 5350 | 4906 | 47 | 0.88 | 0.96 | ||
B | Escherichia_coli_O157H7 | 5341 | 4595 | 27 | 0.51 | 0.59 | ||
B | Escherichia_coli_O157H7_EDL933 | 5324 | 4611 | 27 | 0.51 | 0.59 | ||
B | Bacillus_anthracis_Ames | 5311 | 4334 | 37 | 0.7 | 0.85 | ||
B | Agrobacterium_tumefaciens_C58_Cereon | 5288 | 4855 | 40 | 0.76 | 0.82 | ||
B | Bacillus_anthracis_str_Sterne | 5287 | 4590 | 35 | 0.66 | 0.76 | ||
B | Bacillus_cereus_ATCC14579 | 5255 | 4502 | 40 | 0.76 | 0.89 | ||
B | Bacillus_thuringiensis_konkukian | 5197 | 4621 | 42 | 0.81 | 0.91 | ||
B | Pseudomonas_syringae_phaseolicola_1448A | 5169 | 4732 | 28 | 0.54 | 0.59 | ||
B | Ralstonia_solanacearum | 5116 | 4633 | 37 | 0.72 | 0.8 | ||
B | Pseudomonas_syringae_pv_B728a | 5090 | 4748 | 23 | 0.45 | 0.48 | ||
B | Vibrio_vulnificus_YJ016 | 5024 | 4232 | 34 | 0.68 | 0.8 | ||
B | Bordetella_bronchiseptica | 4994 | 4718 | 22 | 0.44 | 0.47 | ||
B | Colwellia_psychrerythraea_34H | 4910 | 4071 | 21 | 0.43 | 0.52 | ||
B | Vibrio_parahaemolyticus | 4832 | 4161 | 31 | 0.64 | 0.75 | ||
B | Rhodopseudomonas_palustris_CGA009 | 4820 | 4462 | 32 | 0.66 | 0.72 | ||
B | Bacteroides_thetaiotaomicron_VPI-5482 | 4816 | 4479 | 32 | 0.66 | 0.71 | ||
B | Burkholderia_mallei_ATCC_23344 | 4764 | 4213 | 40 | 0.84 | 0.95 | ||
B | Salmonella_typhi | 4758 | 4196 | 26 | 0.55 | 0.62 | ||
B | Leptospira_interrogans_serovar_Lai | 4727 | 3375 | 25 | 0.53 | 0.74 | ||
B | Photorhabdus_luminescens | 4683 | 4126 | 29 | 0.62 | 0.7 | ||
B | Salmonella_enterica_Choleraesuis | 4666 | 4077 | 23 | 0.49 | 0.56 | ||
B | Xanthomonas_oryzae_KACC10331 | 4637 | 4145 | 23 | 0.5 | 0.55 | ||
B | Bacteroides_fragilis_YCH46 | 4625 | 4024 | 30 | 0.65 | 0.75 | ||
B | Azoarcus_sp_EbN1 | 4599 | 4093 | 39 | 0.85 | 0.95 | ||
B | Salmonella_typhimurium_LT2 | 4527 | 4094 | 25 | 0.55 | 0.61 | ||
B | Vibrio_vulnificus_CMCP6 | 4488 | 4080 | 36 | 0.8 | 0.88 | ||
B | Erwinia_carotovora_atroseptica_SCRI1043 | 4472 | 4036 | 20 | 0.6 | 0.68 | ||
B | Shewanella_oneidensis | 4472 | 3956 | 27 | 0.45 | 0.5 | ||
B | Shigella_flexneri_2a | 4443 | 3974 | 26 | 0.59 | 0.65 | ||
B | Gloeobacter_violaceus | 4430 | 3947 | 35 | 0.79 | 0.89 | ||
B | Xanthomonas_citri | 4427 | 4103 | 23 | 0.52 | 0.56 | ||
B | Chromobacterium_violaceum | 4407 | 4037 | 34 | 0.77 | 0.84 | ||
B | Mycobacterium_avium_paratuberculosis | 4350 | 4164 | 36 | 0.83 | 0.86 | ||
B | Salmonella_typhi_Ty2 | 4318 | 3848 | 26 | 0.6 | 0.68 | ||
B | Xanthomonas_campestris_8004 | 4273 | 3921 | 29 | 0.68 | 0.74 | ||
B | Silicibacter_pomeroyi_DSS-3 | 4252 | 4018 | 44 | 1.03 | 1.1 | ||
B | Escherichia_coli_K12 | 4237 | 3862 | 20 | 0.47 | 0.52 | ||
B | Bacteroides_fragilis_NCTC_9434 | 4236 | 3868 | 29 | 0.68 | 0.75 | ||
B | Bacillus_licheniformis_DSM_13 | 4196 | 3675 | 26 | 0.62 | 0.71 | ||
B | Mycobacterium_tuberculosis_CDC1551 | 4189 | 3636 | 20 | 0.48 | 0.55 | ||
B | Bordetella_parapertussis | 4185 | 3979 | 25 | 0.6 | 0.63 | ||
B | Xanthomonas_campestris | 4181 | 3862 | 29 | 0.69 | 0.75 | ||
B | Dechloromonas_aromatica_RCB | 4171 | 3885 | 29 | 0.7 | 0.75 | ||
B | Bacillus_licheniformis_ATCC_14580 | 4152 | 3630 | 23 | 0.55 | 0.63 | ||
B | Yersinia_pestis_biovar_Mediaevails | 4142 | 3635 | 15 | 0.36 | 0.41 | ||
B | Bacillus_subtilis | 4105 | 3623 | 28 | 0.68 | 0.77 | ||
B | Bacillus_clausii_KSM-K16 | 4096 | 3766 | 34 | 0.83 | 0.9 | ||
B | Salmonella_enterica_Paratypi_ATCC_9150 | 4093 | 3657 | 25 | 0.61 | 0.68 | ||
B | Yersinia_pestis_KIM | 4086 | 3560 | 17 | 0.42 | 0.48 | ||
B | Shigella_flexneri_2a_2457T | 4068 | 3611 | 23 | 0.57 | 0.64 | ||
B | Yersinia_pestis_CO92 | 4067 | 3658 | 18 | 0.44 | 0.49 | ||
B | Bacillus_halodurans | 4066 | 3554 | 27 | 0.66 | 0.76 | ||
B | Yersinia_pseudotuberculosis_IP32953 | 4038 | 3667 | 23 | 0.57 | 0.63 | ||
B | Mycobacterium_tuberculosis_H37Rv | 3991 | 3695 | 25 | 0.63 | 0.68 | ||
B | Mycobacterium_bovis | 3920 | 3617 | 24 | 0.61 | 0.66 | ||
B | Clostridium_acetobutylicum | 3848 | 3417 | 26 | 0.68 | 0.76 | ||
B | Vibrio_cholerae | 3835 | 3237 | 18 | 0.47 | 0.56 | ||
B | Vibrio_fischeri_ES114 | 3802 | 3499 | 26 | 0.68 | 0.74 | ||
B | Caulobacter_crescentus | 3737 | 3453 | 23 | 0.62 | 0.67 | ||
B | Leptospira_interrogans_serovar_Copenhageni | 3658 | 3271 | 22 | 0.6 | 0.67 | ||
B | Bdellovibrio_bacteriovorus | 3587 | 3332 | 26 | 0.72 | 0.78 | ||
B | Geobacillus_kaustophilus_HTA426 | 3540 | 3012 | 20 | 0.56 | 0.66 | ||
B | Desulfovibrio_vulgaris_Hildenborough | 3531 | 2943 | 18 | 0.51 | 0.61 | ||
B | Oceanobacillus_iheyensis | 3500 | 3119 | 27 | 0.77 | 0.87 | ||
B | Geobacter_sulfurreducens | 3446 | 3080 | 25 | 0.73 | 0.81 | ||
B | Bordetella_pertussis | 3436 | 3253 | 12 | 0.35 | 0.37 | ||
B | Symbiobacterium_thermophilum_IAM14863 | 3337 | 3023 | 29 | 0.87 | 0.96 | ||
B | Acinetobacter_sp_ADP1 | 3325 | 3020 | 20 | 0.6 | 0.66 | ||
B | Brucella_suis_1330 | 3271 | 2690 | 21 | 0.64 | 0.78 | ||
B | Enterococcus_faecalis_V583 | 3265 | 2783 | 17 | 0.52 | 0.61 | ||
B | Desulfotalea_psychrophila_LSv54 | 3234 | 2890 | 24 | 0.74 | 0.83 | ||
B | Brucella_melitensis | 3198 | 2841 | 24 | 0.75 | 0.84 | ||
B | Deinococcus_radiodurans | 3182 | 3000 | 16 | 0.5 | 0.53 | ||
B | Synechocystis_PCC6803 | 3167 | 2907 | 20 | 0.63 | 0.69 | ||
B | Legionella_pneumophila_Paris | 3166 | 2887 | 17 | 0.54 | 0.59 | ||
B | Thermobifida_fusca_YX | 3110 | 2915 | 17 | 0.55 | 0.58 | ||
B | Brucella_abortus_9-941 | 3085 | 2590 | 16 | 0.52 | 0.62 | ||
B | Lactobacillus_plantarum | 3059 | 2762 | 16 | 0.52 | 0.58 | ||
B | Corynebacterium_glutamicum_ATCC_13032_Bielefeld | 3057 | 2734 | 16 | 0.52 | 0.59 | ||
B | Listeria_innocua | 3043 | 2743 | 22 | 0.72 | 0.8 | ||
B | Corynebacterium_glutamicum_ATCC_13032_Kitasato | 2993 | 2740 | 12 | 0.4 | 0.44 | ||
B | Methylococcus_capsulatus_Bath | 2959 | 2708 | 22 | 0.74 | 0.81 | ||
B | Corynebacterium_efficiens_YS-314 | 2950 | 2657 | 15 | 0.51 | 0.56 | ||
B | Legionella_pneumophila_Philadelphia_1 | 2942 | 2740 | 20 | 0.68 | 0.73 | ||
B | Legionella_pneumophila_Lens | 2934 | 2672 | 17 | 0.58 | 0.64 | ||
B | Listeria_monocytogenes | 2846 | 2609 | 19 | 0.67 | 0.73 | ||
B | Xylella_fastidiosa | 2832 | 2079 | 9 | 0.32 | 0.43 | ||
B | Listeria_monocytogenes_4b_F2365 | 2821 | 2529 | 15 | 0.53 | 0.59 | ||
B | Treponema_denticola_ATCC_35405 | 2767 | 2331 | 23 | 0.83 | 0.99 | ||
B | Staphylococcus_aureus_Mu50 | 2731 | 2383 | 17 | 0.62 | 0.71 | ||
B | Clostridium_perfringens | 2723 | 2458 | 19 | 0.7 | 0.77 | ||
B | Staphylococcus_haemolyticus | 2676 | 2256 | 25 | 0.93 | 1.11 | ||
B | Gluconobacter_oxydans_621H | 2664 | 2498 | 16 | 0.6 | 0.64 | ||
B | Staphylococcus_aureus_aureus_MRSA252 | 2656 | 2299 | 19 | 0.72 | 0.83 | ||
B | Staphylococcus_aureus_MW2 | 2632 | 2286 | 18 | 0.68 | 0.79 | ||
B | Idiomarina_loihiensis_L2TR | 2628 | 2443 | 11 | 0.42 | 0.45 | ||
B | Staphylococcus_aureus_N315 | 2619 | 2314 | 16 | 0.61 | 0.69 | ||
B | Staphylococcus_aureus_COL | 2618 | 2251 | 20 | 0.76 | 0.89 | ||
B | Staphylococcus_aureus_aureus_MSSA476 | 2598 | 2264 | 16 | 0.62 | 0.71 | ||
B | Thermoanaerobacter_tengcongensis | 2588 | 2262 | 18 | 0.7 | 0.8 | ||
B | Staphylococcus_epidermidis_RP62A | 2526 | 2081 | 16 | 0.63 | 0.77 | ||
B | Synechococcus_elongatus_PCC_6301 | 2525 | 2334 | 14 | 0.55 | 0.6 | ||
B | Synechococcus_sp_WH8102 | 2517 | 2156 | 16 | 0.64 | 0.74 | ||
B | Staphylococcus_epidermidis_ATCC_12228 | 2485 | 2065 | 14 | 0.56 | 0.68 | ||
B | Thermosynechococcus_elongatus | 2475 | 2204 | 8 | 0.32 | 0.36 | ||
B | Nitrosomonas_europaea | 2461 | 2270 | 28 | 1.14 | 1.23 | ||
B | Clostridium_tetani_E88 | 2432 | 2429 | 24 | 0.99 | 0.99 | ||
B | Mannheimia_succiniciproducens_MBEL55E | 2380 | 1965 | 15 | 0.63 | 0.76 | ||
B | Lactococcus_lactis | 2321 | 2023 | 16 | 0.69 | 0.79 | ||
B | Propionibacterium_acnes_KPA171202 | 2297 | 2102 | 21 | 0.91 | 1 | ||
B | Corynebacterium_diphtheriae | 2272 | 2024 | 21 | 0.92 | 1.04 | ||
B | Prochlorococcus_marinus_MIT9313 | 2265 | 1946 | 11 | 0.49 | 0.57 | ||
B | Chlorobium_tepidum_TLS | 2252 | 1768 | 17 | 0.75 | 0.96 | ||
B | Thermus_thermophilus_HB8 | 2238 | 2036 | 18 | 0.8 | 0.88 | ||
B | Thermus_thermophilus_HB27 | 2210 | 2034 | 17 | 0.77 | 0.84 | ||
B | Corynebacterium_jeikeium_K411 | 2137 | 1979 | 12 | 0.56 | 0.61 | ||
B | Streptococcus_agalactiae_2603 | 2124 | 1831 | 20 | 0.94 | 1.09 | ||
B | Psychrobacter_arcticum_273-4 | 2120 | 1974 | 15 | 0.71 | 0.76 | ||
B | Streptococcus_agalactiae_NEM316 | 2094 | 1887 | 22 | 1 | 1.23 | ||
B | Streptococcus_pneumoniae_TIGR4 | 2094 | 1701 | 21 | 1.05 | 1.17 | ||
B | Neisseria_meningitidis_MC58 | 2079 | 1744 | 16 | 0.77 | 0.92 | ||
B | Fusobacterium_nucleatum | 2067 | 1840 | 18 | 0.87 | 0.98 | ||
B | Neisseria_meningitidis_Z2491 | 2065 | 1729 | 21 | 1.02 | 1.21 | ||
B | Coxiella_burnetii | 2046 | 1656 | 13 | 0.64 | 0.79 | ||
B | Streptococcus_pneumoniae_R6 | 2043 | 1723 | 20 | 0.73 | 0.79 | ||
B | Wolinella_succinogenes | 2043 | 1900 | 15 | 0.98 | 1.16 | ||
B | Xylella_fastidiosa_Temecula1 | 2036 | 1841 | 15 | 0.74 | 0.81 | ||
B | Parachlamydia_sp_UWE25 | 2031 | 1675 | 17 | 0.84 | 1.01 | ||
B | Leifsonia_xyli_xyli_CTCB0 | 2030 | 1785 | 16 | 0.79 | 0.9 | ||
B | Pasteurella_multocida | 2015 | 1902 | 28 | 1.39 | 1.47 | ||
B | Neisseria_gonorrhoeae_FA_1090 | 2002 | 1672 | 17 | 0.85 | 1.02 | ||
B | Zymomonas_mobilis_ZM4 | 1998 | 1634 | 11 | 0.55 | 0.67 | ||
B | Streptococcus_mutans | 1960 | 1690 | 20 | 1.02 | 1.18 | ||
B | Streptococcus_thermophilus_CNRZ1066 | 1915 | 1554 | 18 | 0.94 | 1.16 | ||
B | Porphyromonas_gingivalis_W83 | 1909 | 1680 | 4 | 0.21 | 0.24 | ||
B | Streptococcus_pyogenes_MGAS6180 | 1894 | 1576 | 18 | 0.95 | 1.14 | ||
B | Prochlorococcus_marinus_NATL2A | 1890 | 1516 | 9 | 0.48 | 0.59 | ||
B | Streptococcus_thermophilus_LMG_18311 | 1889 | 1541 | 18 | 0.95 | 1.17 | ||
B | Streptococcus_pyogenes_MGAS10394 | 1886 | 1582 | 13 | 0.69 | 0.82 | ||
B | Prochlorococcus_marinus_CCMP1375 | 1882 | 1492 | 8 | 0.43 | 0.54 | ||
B | Helicobacter_hepaticus | 1875 | 1630 | 7 | 0.37 | 0.43 | ||
B | Streptococcus_pyogenes_MGAS315 | 1865 | 1596 | 12 | 0.7 | 0.84 | ||
B | Streptococcus_pyogenes_MGAS5005 | 1865 | 1545 | 13 | 0.64 | 0.75 | ||
B | Lactobacillus_acidophilus_NCFM | 1864 | 1653 | 11 | 0.59 | 0.67 | ||
B | Streptococcus_pyogenes_SSI-1 | 1861 | 1573 | 13 | 0.7 | 0.83 | ||
B | Thermotoga_maritima | 1858 | 1695 | 15 | 0.81 | 0.88 | ||
B | Streptococcus_pyogenes_MGAS8232 | 1845 | 1584 | 14 | 0.76 | 0.88 | ||
B | Campylobacter_jejuni_RM1221 | 1838 | 1592 | 12 | 0.65 | 0.75 | ||
B | Lactobacillus_johnsonii_NCC_533 | 1821 | 1669 | 10 | 0.55 | 0.6 | ||
B | Haemophilus_influenzae_86_028NP | 1791 | 1623 | 9 | 0.5 | 0.55 | ||
B | Bifidobacterium_longum | 1727 | 1642 | 15 | 0.87 | 0.91 | ||
B | Haemophilus_ducreyi_35000HP | 1717 | 1410 | 8 | 0.47 | 0.57 | ||
B | Prochlorococcus_marinus_MED4 | 1712 | 1450 | 13 | 0.76 | 0.9 | ||
B | Streptococcus_pyogenes_M1_GAS | 1697 | 1509 | 11 | 0.65 | 0.73 | ||
B | Haemophilus_influenzae | 1657 | 1523 | 10 | 0.6 | 0.66 | ||
B | Borrelia_burgdorferi | 1639 | 1333 | 5 | 0.31 | 0.38 | ||
B | Campylobacter_jejuni | 1629 | 1483 | 10 | 0.61 | 0.67 | ||
B | Mycobacterium_leprae | 1605 | 1456 | 11 | 0.69 | 0.76 | ||
B | Francisella_tularensis_tularensis | 1603 | 1480 | 10 | 0.62 | 0.68 | ||
B | Dehalococcoides_ethenogenes_195 | 1580 | 1296 | 11 | 0.7 | 0.85 | ||
B | Helicobacter_pylori_26695 | 1576 | 1401 | 10 | 0.63 | 0.71 | ||
B | Aquifex_aeolicus | 1560 | 1518 | 17 | 1.09 | 1.12 | ||
B | Rickettsia_felis_URRWXCal2 | 1512 | 1306 | 12 | 0.79 | 0.92 | ||
B | Helicobacter_pylori_J99 | 1491 | 1370 | 6 | 0.4 | 0.44 | ||
B | Bartonella_henselae_Houston-1 | 1488 | 1306 | 5 | 0.34 | 0.38 | ||
B | Rickettsia_conorii | 1374 | 991 | 7 | 0.51 | 0.71 | ||
B | Candidatus_Pelagibacter_ubique_HTCC1062 | 1354 | 1242 | 8 | 0.59 | 0.64 | ||
B | Wolbachia_endosymbiont_of_Drosophila_melanogaster | 1195 | 967 | 11 | 0.92 | 1.14 | ||
B | Bartonella_quintana_Toulouse | 1142 | 1060 | 12 | 1.05 | 1.13 | ||
B | Chlamydophila_pneumoniae_TW_183 | 1113 | 974 | 5 | 0.45 | 0.51 | ||
B | Chlamydophila_pneumoniae_AR39 | 1112 | 961 | 4 | 0.36 | 0.42 | ||
B | Chlamydophila_pneumoniae_J138 | 1069 | 979 | 4 | 0.37 | 0.41 | ||
B | Chlamydophila_pneumoniae_CWL029 | 1052 | 966 | 4 | 0.38 | 0.41 | ||
B | Mycoplasma_penetrans | 1037 | 960 | 7 | 0.68 | 0.73 | ||
B | Treponema_pallidum | 1036 | 919 | 5 | 0.48 | 0.54 | ||
B | Mycoplasma_mycoides | 1016 | 890 | 7 | 0.69 | 0.79 | ||
B | Chlamydophila_caviae | 1005 | 912 | 10 | 1 | 1.1 | ||
B | Ehrlichia_ruminantium_str._Welgevonden | 958 | 851 | 8 | 0.84 | 0.94 | ||
B | Ehrlichia_ruminantium_Gardel | 950 | 849 | 11 | 1.16 | 1.3 | ||
B | Anaplasma_marginale_St_Maries | 949 | 877 | 8 | 0.84 | 0.91 | ||
B | Borrelia_garinii_PBi | 932 | 838 | 9 | 0.32 | 0.34 | ||
B | Chlamydophila_abortus_S26_3 | 932 | 877 | 3 | 0.97 | 1.07 | ||
B | Chlamydia_muridarum | 911 | 834 | 4 | 0.44 | 0.48 | ||
B | Chlamydia_trachomatis | 895 | 833 | 1 | 0.11 | 0.12 | ||
B | Ehrlichia_ruminantium_Welgevonden | 888 | 837 | 11 | 1.24 | 1.31 | ||
B | Rickettsia_typhi_wilmington | 838 | 756 | 6 | 0.72 | 0.79 | ||
B | Rickettsia_prowazekii | 835 | 772 | 5 | 0.6 | 0.65 | ||
B | Tropheryma_whipplei_Twist | 808 | 734 | 6 | 0.74 | 0.82 | ||
B | Wolbachia_endosymbiont_of_Brugia_malayi_TRS | 805 | 674 | 5 | 0.62 | 0.74 | ||
B | Tropheryma_whipplei_TW08_27 | 783 | 729 | 5 | 0.64 | 0.69 | ||
B | Mycoplasma_pulmonis | 782 | 705 | 5 | 0.64 | 0.71 | ||
B | Onion_yellows_phytoplasma | 754 | 680 | 10 | 1.33 | 1.47 | ||
B | Mycoplasma_gallisepticum | 726 | 689 | 3 | 0.41 | 0.44 | ||
B | Mycoplasma_hyopneumoniae_232 | 691 | 626 | 4 | 0.58 | 0.64 | ||
B | Mycoplasma_pneumoniae | 689 | 663 | 4 | 0.58 | 0.6 | ||
B | Mesoplasma_florum_L1 | 682 | 635 | 8 | 1.17 | 1.26 | ||
B | Mycoplasma_synoviae_53 | 672 | 624 | 2 | 0.3 | 0.32 | ||
B | Mycoplasma_hyopneumoniae_J | 665 | 615 | 1 | 0.15 | 0.16 | ||
B | Mycoplasma_hyopneumoniae_7448 | 663 | 619 | 4 | 0.6 | 0.65 | ||
B | Mycoplasma_mobile_163K | 633 | 594 | 5 | 0.79 | 0.84 | ||
B | Wigglesworthia_brevipalpis | 617 | 581 | 1 | 0.16 | 0.17 | ||
B | Ureaplasma_urealyticum | 614 | 558 | 3 | 0.49 | 0.54 | ||
B | Blochmannia_floridanus | 583 | 548 | 3 | 0.51 | 0.55 | ||
B | Buchnera_sp | 574 | 531 | 4 | 0.7 | 0.75 | ||
B | Buchnera_aphidicola_Sg | 546 | 507 | 4 | 0.73 | 0.79 | ||
B | Buchnera_aphidicola | 504 | 466 | 2 | 0.4 | 0.43 | ||
B | Mycoplasma_genitalium | 484 | 462 | 4 | 0.83 | 0.87 | ||
[Reference] | ||||||||
Ke R., Sakiyama N., Sawada R., Sonoyama M. and Mitaku S., (submission) | ||||||||
Vertebrate genomes code excess proteins with charge periodicity of 28 residues | ||||||||
[Abstract] [Full Text(FDP)] | ||||||||
Ke R., Sakiyama N., Sawada R., Sonoyama M. and Mitaku S., Jpn. J. Appl. Phys. 46 6083-6086 (2007) | ||||||||
Human Genome Encodes Many Proteins with Charge Periodicity of 28 Residues | ||||||||
[Abstract] [Full Text(FDP)] | ||||||||
[Related papers] | ||||||||
Ke R. and Mitaku S., J. Phys: Condens. Matter 17 S2825-S2831 (2005) | ||||||||
Local repulsion in protein structures as revealed by charge distribution analysis of all amino acid sequences from the Saccharomyces Cerevisiae genome | ||||||||
[Abstract] [Full Text(FDP)] |