Dumbbell-type Protein Database by SOSUIdumbbell

(1)Analysis of Amino Acid Sequences is PDB (release 93)





PDB ID
Calmodulin: 1A29 1AHR 1CDL 1CDM 1CFC 1CFD

1CFF 1CKK 1CLL 1CLM 1CM1 1CM4

1CTR 1DEG 1DMO 1LIN 1MUX 1OSA

1QIV 1QIW 2BBM 2BBN 3CLN 4CLN
Troponin C: 1A2X 1AJ4 1DTL 1NCX 1NCY 1NCZ

1TCF 1TN4 1TNW 1TNX 1TOP 2TN4

4TNC 5TNC



Transcription Factor ‡VA: 1TF6




(2) Analyses of Total Genomes (March 2001)


Species ORF number Dumbbell-type number
Eubacteria
A_aeolicus 1522 1


B_burgdoriferi 1638 8


B_subtilis 4099 1


C_jejuni 1634 1


C_pneumoniae 1052 2


C_trachomatis 893 1


D_radiodurans 3068 0


E_coli 4290 0


H_influenzae 1713 0


H_pyloriJ99 1491 1


H_pylori 1577 0


M_genitalium 467 1


M_pneumoniae 677 1


M_tuberculosis 3918 1


Synechocystis PCC 3169 0


T_maritima 1846 1


T_pallidum 1031 2


U_urealyticum 611 0


R_prowazekii 834 3


C_pneumoniaeAR39 1110 2


CpneumoniaeJ138 1070 2


C_muridarum 818 0


V_cholerae 3828 0


X_fastidiosa 2766 2


P_falciparum 205 0


M_parasite 220 2
Archaea
A_fulgidus 2409 1


M_jannaschii 1715 1


M_thermoautotrophicum 1817 0


P_abyssi 1765 0
Eukaryotes
A_thaliana(chr2,4) 7859 13


C_elegans 19730 40


D_melanogaster 14100 40


S_cerevisiae 6217 17

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